Xyce  6.1
Xyce::Device::Neuron3::Instance Class Reference

#include <N_DEV_Neuron3.h>

Inheritance diagram for Xyce::Device::Neuron3::Instance:
Collaboration diagram for Xyce::Device::Neuron3::Instance:

Public Member Functions

 Instance (const Configuration &configuration, const InstanceBlock &IB, Model &Miter, const FactoryBlock &factory_block)
 
 ~Instance ()
 
void registerLIDs (const std::vector< int > &intLIDVecRef, const std::vector< int > &extLIDVecRef)
 
void registerStateLIDs (const std::vector< int > &staLIDVecRef)
 
void loadNodeSymbols (Util::SymbolTable &symbol_table) const
 Populates and returns the store name map. More...
 
const std::vector< std::vector< int > > & jacobianStamp () const
 
void registerJacLIDs (const std::vector< std::vector< int > > &jacLIDVec)
 
bool processParams ()
 
bool updateTemperature (const double &temp_tmp)
 
bool updateIntermediateVars ()
 
bool updatePrimaryState ()
 
bool updateSecondaryState ()
 
bool setIC ()
 
void varTypes (std::vector< char > &varTypeVec)
 
bool loadDAEQVector ()
 
bool loadDAEFVector ()
 
void auxDAECalculations ()
 
bool loadDAEdQdx ()
 
bool loadDAEdFdx ()
 
ModelgetModel ()
 
- Public Member Functions inherited from Xyce::Device::DeviceInstance
 DeviceInstance (const InstanceBlock &instance_block, ParametricData< void > &parametric_data, const FactoryBlock &factory_block)
 
virtual ~DeviceInstance ()
 
virtual std::ostream & printName (std::ostream &os) const
 
virtual void enableLeadCurrentCalc ()
 
virtual void registerGIDs (const IndexPairVector &intGIDListRef, const IndexPairVector &extGIDListRef)
 
virtual void registerStateGIDs (const IndexPairVector &staGIDListRef)
 
virtual void registerStoreGIDs (const IndexPairVector &stoGIDListRef)
 
virtual void registerStoreLIDs (const LocalIdVector &stoLIDVecRef)
 
virtual void registerBranchDataLIDs (const LocalIdVector &branchDataLIDVecRef)
 
virtual const std::vector< std::string > & getDepSolnVars ()
 
virtual void registerDepSolnGIDs (const std::vector< IdVector > &varList)
 
virtual const std::vector< std::string > & getDepStateVars ()
 
virtual void registerDepStateGIDs (const std::vector< IdVector > &varList)
 
virtual const std::vector< std::string > & getDepStoreVars ()
 
virtual void registerDepStoreGIDs (const std::vector< IdVector > &varList)
 
virtual const std::vector< std::string > & getDepLeadCurrentVars ()
 
virtual void registerDepLeadCurrentGIDs (const std::vector< IdVector > &varList)
 
virtual void registerDepSolnLIDs (const std::vector< IdVector > &depSolnLIDVecRef)
 
virtual void registerDepStateLIDs (const std::vector< IdVector > &depStaLIDVecRef)
 
virtual void registerDepStoreLIDs (const std::vector< IdVector > &depStoLIDVecRef)
 
virtual void registerGIDData (const std::vector< int > &counts, const IdVector &GIDs, const JacobianStamp &jacGIDs)
 
virtual void setupPointers ()
 
virtual const IdVectorgetDepSolnGIDVec ()
 
virtual const IndexPairVector & getIndexPairList ()
 
virtual bool getInstanceBreakPoints (std::vector< Util::BreakPoint > &breakPointTimes)
 
virtual bool updateSource ()
 
virtual bool processInstanceParams ()
 
virtual bool isConverged ()
 
virtual bool testDAEMatrices (const std::vector< const std::string * > &nameVec)
 
virtual bool loadTrivialDAE_FMatrixStamp ()
 
bool trivialStampLoader (Linear::Matrix *matPtr)
 
bool zeroMatrixDiagonal (Linear::Matrix *matPtr)
 
virtual bool plotfileFlag ()
 
virtual void loadErrorWeightMask ()
 
virtual void acceptStep ()
 
virtual bool loadDAEBVector ()
 
virtual int getNumNoiseSources () const
 
virtual void setupNoiseSources (Xyce::Analysis::NoiseData &noiseDataVec)
 
virtual void getNoiseSources (Xyce::Analysis::NoiseData &noiseDataVec)
 
const InstanceNamegetName () const
 
int getNumIntVars () const
 
int getNumExtVars () const
 
int getNumStateVars () const
 
int getNumStoreVars () const
 
int getNumBranchDataVars () const
 
void setNumStoreVars (int num_store_vars)
 
void setNumBranchDataVars (int num_branch_data_vars)
 
virtual const std::vector< int > & getDevConMap ()
 
virtual DeviceStategetInternalState ()
 
virtual bool setInternalState (const DeviceState &state)
 
virtual bool loadDFDV (int iElectrode, Linear::Vector *dfdvPtr)
 
virtual bool calcConductance (int iElectrode, const Linear::Vector *dxdvPtr)
 
virtual bool outputPlotFiles ()
 
virtual bool enablePDEContinuation (int &max_PDE_continuation_steps)
 
virtual bool disablePDEContinuation ()
 
virtual void setPDEContinuationAlpha (double alpha)
 
virtual void setPDEContinuationBeta (double beta)
 
virtual bool setInitialGuess ()
 
virtual double getMaxTimeStepSize ()
 
bool getOrigFlag () const
 
void setOrigFlag (bool origFlag_local)
 
const IdVectorgetDevLIDs () const
 
const std::vector< IdVector > & getDevJacLIDs () const
 
const IdVectorgetStaLIDVec () const
 
bool getMergeRowColChecked () const
 
void setMergeRowColChecked (bool mergeRowColChecked_local)
 
const MatrixLoadDatagetMatrixLoadData () const
 
MatrixLoadDatagetMatrixLoadData ()
 
const ExternDatagetExternData () const
 
- Public Member Functions inherited from Xyce::Device::DeviceEntity
 DeviceEntity (ParametricData< void > &parametric_data, const SolverState &solver_state, const DeviceOptions &device_options, const std::string &netlist_filename, int netlist_line)
 
virtual ~DeviceEntity ()
 
virtual CompositeParamconstructComposite (const std::string &composite_name, const std::string &param_name)
 
bool setDefaultParam (double val, bool overrideOriginal=false)
 
double getDefaultParam () const
 
bool scaleParam (const std::string &paramName, double val, double val0)
 
bool scaleParam (const std::string &paramName, double val)
 
bool scaleDefaultParam (double val)
 
bool analyticSensitivityAvailable (const std::string &paramName)
 
bool getAnalyticSensitivity (const std::string &paramName, std::vector< double > &dfdpVec, std::vector< double > &dqdpVec, std::vector< double > &dbdpVec, std::vector< int > &FindicesVec, std::vector< int > &QindicesVec, std::vector< int > &BindicesVec)
 
bool setParam (const std::string &paramName, double val, bool overrideOriginal=false)
 
bool getParam (const std::string &paramName, double &result) const
 
bool getParamBreakpoints (std::vector< Util::BreakPoint > &)
 
bool updateDependentParameters (Linear::Vector &vars)
 
bool updateDependentParameters (double temp_tmp)
 
bool updateGlobalParameters (GlobalParameterMap &)
 
bool updateDependentParameters ()
 
double setDependentParameter (Util::Param &, double *, ParameterType::ExprAccess)
 
double setDependentParameter (Util::Param &, std::vector< double > *, int, ParameterType::ExprAccess)
 
void setDependentParameter (Util::Param &par, Depend &dependentParam, ParameterType::ExprAccess depend)
 
void setDefaultParams ()
 
void setParams (const std::vector< Param > &params)
 
bool given (const std::string &parameter_name) const
 
void setDefaultParamName (const std::string &default_param_name)
 
const std::vector< Depend > & getDependentParams ()
 
void addDependentParameter (const Depend &param)
 
const DeviceOptionsgetDeviceOptions () const
 
const SolverStategetSolverState () const
 
const NetlistLocation & netlistLocation () const
 
const ParameterMapgetParameterMap () const
 
- Public Member Functions inherited from Xyce::Device::ParameterBase
 ParameterBase ()
 
virtual ~ParameterBase ()
 
double getOriginalValue (int serial_number)
 
void setOriginalValue (int serial_number, double value)
 
bool wasValueGiven (int serial_number) const
 
void setValueGiven (int serial_number, bool value)
 

Private Member Functions

 Instance (const Instance &)
 
Instanceoperator= (const Instance &)
 

Static Private Member Functions

template<typename ScalarT >
static ScalarT alphaN (const ScalarT &Vn1, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT betaN (const ScalarT &Vn1, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT alphaM (const ScalarT &Vn1, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT betaM (const ScalarT &Vn1, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT alphaH (const ScalarT &Vn1, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT betaH (const ScalarT &Vn1, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT kcl1EquF (const ScalarT &VSeg, const ScalarT &VSegP, const ScalarT &VSegN, const ScalarT &n, const ScalarT &m, const ScalarT &h, const ScalarT &gPrev, const ScalarT &gNext, const ScalarT &memG, const ScalarT &restV, const ScalarT &Kg, const ScalarT &Ke, const ScalarT &NaG, const ScalarT &NaE)
 
template<typename ScalarT >
static ScalarT kcl1EquQ (const ScalarT &VSeg, const ScalarT &memC)
 
template<typename ScalarT >
static ScalarT nEquF (const ScalarT &Vn1, const ScalarT &n, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT nEquQ (const ScalarT &n)
 
template<typename ScalarT >
static ScalarT mEquF (const ScalarT &Vn1, const ScalarT &m, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT mEquQ (const ScalarT &m)
 
template<typename ScalarT >
static ScalarT hEquF (const ScalarT &Vn1, const ScalarT &h, const ScalarT &Vrest)
 
template<typename ScalarT >
static ScalarT hEquQ (const ScalarT &h)
 

Private Attributes

Modelmodel_
 
std::vector< std::vector< int > > jacStamp
 
double rInt
 
double radius
 
double length
 
double segArea
 
int nSeg
 
bool rIntGiven
 
bool radiusGiven
 
bool lengthGiven
 
bool nSegGiven
 
double rIntPrevious
 
double radiusPrevious
 
double lengthPrevious
 
double rIntNext
 
double radiusNext
 
double lengthNext
 
bool rIntPreviousGiven
 
bool radiusPreviousGiven
 
bool lengthPreviousGiven
 
bool rIntNextGiven
 
bool radiusNextGiven
 
bool lengthNextGiven
 
std::vector< double > gBackward
 
std::vector< double > gForward
 
double kcl1Fvalue
 
double kcl2Fvalue
 
std::vector< double > segFvalue
 
std::vector< double > segQvalue
 
std::vector< double > segNEquFvalue
 
std::vector< double > segNEquQvalue
 
std::vector< double > segMEquFvalue
 
std::vector< double > segMEquQvalue
 
std::vector< double > segHEquFvalue
 
std::vector< double > segHEquQvalue
 
double dkcl1F_dVin
 
double dkcl1F_dVs0
 
double dkcl2F_dVout
 
double dkcl2F_dVsn
 
std::vector< double > segF_dVp
 
std::vector< double > segF_dV
 
std::vector< double > segF_dVn
 
std::vector< double > segF_dn
 
std::vector< double > segF_dm
 
std::vector< double > segF_dh
 
std::vector< double > segQ_dV
 
std::vector< double > dnF_dV
 
std::vector< double > dnF_dn
 
std::vector< double > dnQ_dn
 
std::vector< double > dmF_dV
 
std::vector< double > dmF_dm
 
std::vector< double > dmQ_dm
 
std::vector< double > dhF_dV
 
std::vector< double > dhF_dh
 
std::vector< double > dhQ_dh
 
std::vector< double > potassiumCurrent
 
std::vector< double > sodiumCurrent
 
std::vector< int > li_KCurrentState
 
std::vector< int > li_NaCurrentState
 
int li_Pos
 
int li_Neg
 
std::vector< int > li_Vol
 
std::vector< int > li_nPro
 
std::vector< int > li_mPro
 
std::vector< int > li_hPro
 
int APosEquPosNodeOffset
 
int APosEquNextNodeOffset
 
int ANegEquNegNodeOffset
 
int ANegEquLastNodeOffset
 
std::vector< int > SegVEqnVpreOffset
 
std::vector< int > SegVEqnVsegOffset
 
std::vector< int > SegVEqnVnexOffset
 
std::vector< int > SegVEqnNOffset
 
std::vector< int > SegVEqnMOffset
 
std::vector< int > SegVEqnHOffset
 
std::vector< int > NEquVNodeOffset
 
std::vector< int > NEquNNodeOffset
 
std::vector< int > MEquVNodeOffset
 
std::vector< int > MEquMNodeOffset
 
std::vector< int > HEquVNodeOffset
 
std::vector< int > HEquHNodeOffset
 

Friends

class ParametricData< Instance >
 
class Model
 
class Traits
 

Additional Inherited Members

- Public Attributes inherited from Xyce::Device::DeviceInstance
std::vector< int > & cols
 
std::vector< double > & vals
 
NumericalJacobiannumJacPtr
 
bool psLoaded
 
bool ssLoaded
 
bool rhsLoaded
 
bool origFlag
 
int numIntVars
 
int numExtVars
 
int numStateVars
 
int numStoreVars
 
int numLeadCurrentVars
 
int numLeadCurrentStoreVars
 
bool loadLeadCurrent
 
int numBranchDataVars
 
int numBranchDataVarsIfAllocated
 
std::vector< int > devConMap
 
bool mergeRowColChecked
 
- Protected Member Functions inherited from Xyce::Device::DeviceInstance
void jacStampMap (const JacobianStamp &stamp_parent, IdVector &map_parent, JacobianStamp &map2_parent, JacobianStamp &stamp, IdVector &map, JacobianStamp &map2, int from, int to, int original_size)
 
void jacStampMap_fixOrder (const JacobianStamp &stamp_parent, JacobianStamp &map2_parent, JacobianStamp &stamp, JacobianStamp &map2)
 
void outputJacStamp (const JacobianStamp &jac)
 
void outputJacMaps (const std::vector< int > &jacMap, const JacobianStamp &jacMap2)
 
- Protected Attributes inherited from Xyce::Device::DeviceInstance
const ExternDataextData
 
IndexPairVector indexPairList
 
IndexPairVector intGIDList
 
IndexPairVector extGIDList
 
IndexPairVector staGIDList
 
IdVector intLIDVec
 
IdVector extLIDVec
 
IdVector staLIDVec
 
IdVector stoLIDVec
 
IdVector devLIDs
 devLIDs is a combined LID vector, containing int, ext, and expVar ID's. More...
 
JacobianStamp devJacLIDs
 
DeviceSupport devSupport
 
- Protected Attributes inherited from Xyce::Device::DeviceEntity
std::vector< int > expVarGIDs
 
std::vector< int > expVarLIDs
 
std::vector< std::string > expVarNames
 
std::vector< double > expVarVals
 
std::vector< double > eVarVals
 

Detailed Description

Definition at line 89 of file N_DEV_Neuron3.h.

Constructor & Destructor Documentation

Xyce::Device::Neuron3::Instance::Instance ( const Configuration configuration,
const InstanceBlock IB,
Model Miter,
const FactoryBlock factory_block 
)

Definition at line 289 of file N_DEV_Neuron3.C.

Xyce::Device::Neuron3::Instance::~Instance ( )

Definition at line 574 of file N_DEV_Neuron3.C.

Xyce::Device::Neuron3::Instance::Instance ( const Instance )
private

Member Function Documentation

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::alphaH ( const ScalarT &  Vn1,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 213 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::alphaM ( const ScalarT &  Vn1,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 184 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::alphaN ( const ScalarT &  Vn1,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 156 of file N_DEV_Neuron3.h.

void Xyce::Device::Neuron3::Instance::auxDAECalculations ( )
template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::betaH ( const ScalarT &  Vn1,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 222 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::betaM ( const ScalarT &  Vn1,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 203 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::betaN ( const ScalarT &  Vn1,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 174 of file N_DEV_Neuron3.h.

Model& Xyce::Device::Neuron3::Instance::getModel ( )
inline

Definition at line 332 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::hEquF ( const ScalarT &  Vn1,
const ScalarT &  h,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 316 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::hEquQ ( const ScalarT &  h)
inlinestaticprivate

Definition at line 323 of file N_DEV_Neuron3.h.

const std::vector< std::vector< int > > & Xyce::Device::Neuron3::Instance::jacobianStamp ( ) const
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 684 of file N_DEV_Neuron3.C.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::kcl1EquF ( const ScalarT &  VSeg,
const ScalarT &  VSegP,
const ScalarT &  VSegN,
const ScalarT &  n,
const ScalarT &  m,
const ScalarT &  h,
const ScalarT &  gPrev,
const ScalarT &  gNext,
const ScalarT &  memG,
const ScalarT &  restV,
const ScalarT &  Kg,
const ScalarT &  Ke,
const ScalarT &  NaG,
const ScalarT &  NaE 
)
inlinestaticprivate

Definition at line 245 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::kcl1EquQ ( const ScalarT &  VSeg,
const ScalarT &  memC 
)
inlinestaticprivate

Definition at line 257 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::loadDAEdFdx ( )
virtual

Implements Xyce::Device::DeviceInstance.

Definition at line 1108 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::loadDAEdQdx ( )
virtual

Implements Xyce::Device::DeviceInstance.

Definition at line 1079 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::loadDAEFVector ( )
virtual

Implements Xyce::Device::DeviceInstance.

Definition at line 1050 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::loadDAEQVector ( )
virtual

Implements Xyce::Device::DeviceInstance.

Definition at line 1019 of file N_DEV_Neuron3.C.

void Xyce::Device::Neuron3::Instance::loadNodeSymbols ( Util::SymbolTable &  symbol_table) const
virtual

Populates and returns the store name map.

If the DeviceInstance::storeNameMap is empty, populate it.

For the purpose of lead currents, store vector elements must be given names that can be used to locate lead currents at print time. When a netlist attempts to print, say, "I(R1)" the output code looks for an entry in the store vector named R1:DEV_I.

This method does the assignment of names to various vector elements.

Author
David G. Baur
Date
12/18/2014

Implements Xyce::Device::DeviceInstance.

Definition at line 640 of file N_DEV_Neuron3.C.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::mEquF ( const ScalarT &  Vn1,
const ScalarT &  m,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 301 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::mEquQ ( const ScalarT &  m)
inlinestaticprivate

Definition at line 308 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::nEquF ( const ScalarT &  Vn1,
const ScalarT &  n,
const ScalarT &  Vrest 
)
inlinestaticprivate

Definition at line 286 of file N_DEV_Neuron3.h.

template<typename ScalarT >
static ScalarT Xyce::Device::Neuron3::Instance::nEquQ ( const ScalarT &  n)
inlinestaticprivate

Definition at line 293 of file N_DEV_Neuron3.h.

Instance& Xyce::Device::Neuron3::Instance::operator= ( const Instance )
private
bool Xyce::Device::Neuron3::Instance::processParams ( )
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 256 of file N_DEV_Neuron3.C.

void Xyce::Device::Neuron3::Instance::registerJacLIDs ( const std::vector< std::vector< int > > &  jacLIDVec)
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 697 of file N_DEV_Neuron3.C.

void Xyce::Device::Neuron3::Instance::registerLIDs ( const std::vector< int > &  intLIDVecRef,
const std::vector< int > &  extLIDVecRef 
)
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 586 of file N_DEV_Neuron3.C.

void Xyce::Device::Neuron3::Instance::registerStateLIDs ( const std::vector< int > &  staLIDVecRef)
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 661 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::setIC ( )
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 1148 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::updateIntermediateVars ( )
virtual

Implements Xyce::Device::DeviceInstance.

Definition at line 767 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::updatePrimaryState ( )
virtual

Implements Xyce::Device::DeviceInstance.

Definition at line 971 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::updateSecondaryState ( )
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 997 of file N_DEV_Neuron3.C.

bool Xyce::Device::Neuron3::Instance::updateTemperature ( const double &  temp_tmp)
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 275 of file N_DEV_Neuron3.C.

void Xyce::Device::Neuron3::Instance::varTypes ( std::vector< char > &  varTypeVec)
virtual

Reimplemented from Xyce::Device::DeviceInstance.

Definition at line 1163 of file N_DEV_Neuron3.C.

Friends And Related Function Documentation

friend class Model
friend

Definition at line 92 of file N_DEV_Neuron3.h.

friend class ParametricData< Instance >
friend

Definition at line 91 of file N_DEV_Neuron3.h.

friend class Traits
friend

Definition at line 93 of file N_DEV_Neuron3.h.

Member Data Documentation

int Xyce::Device::Neuron3::Instance::ANegEquLastNodeOffset
private

Definition at line 416 of file N_DEV_Neuron3.h.

int Xyce::Device::Neuron3::Instance::ANegEquNegNodeOffset
private

Definition at line 416 of file N_DEV_Neuron3.h.

int Xyce::Device::Neuron3::Instance::APosEquNextNodeOffset
private

Definition at line 415 of file N_DEV_Neuron3.h.

int Xyce::Device::Neuron3::Instance::APosEquPosNodeOffset
private

Definition at line 415 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dhF_dh
private

Definition at line 393 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dhF_dV
private

Definition at line 393 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dhQ_dh
private

Definition at line 393 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::dkcl1F_dVin
private

Definition at line 386 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::dkcl1F_dVs0
private

Definition at line 386 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::dkcl2F_dVout
private

Definition at line 387 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::dkcl2F_dVsn
private

Definition at line 387 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dmF_dm
private

Definition at line 392 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dmF_dV
private

Definition at line 392 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dmQ_dm
private

Definition at line 392 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dnF_dn
private

Definition at line 391 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dnF_dV
private

Definition at line 391 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::dnQ_dn
private

Definition at line 391 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::gBackward
private

Definition at line 372 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::gForward
private

Definition at line 373 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::HEquHNodeOffset
private

Definition at line 428 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::HEquVNodeOffset
private

Definition at line 427 of file N_DEV_Neuron3.h.

std::vector< std::vector<int> > Xyce::Device::Neuron3::Instance::jacStamp
private

Definition at line 341 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::kcl1Fvalue
private

Definition at line 377 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::kcl2Fvalue
private

Definition at line 378 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::length
private

Definition at line 346 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::lengthGiven
private

Definition at line 351 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::lengthNext
private

Definition at line 362 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::lengthNextGiven
private

Definition at line 368 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::lengthPrevious
private

Definition at line 359 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::lengthPreviousGiven
private

Definition at line 365 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::li_hPro
private

Definition at line 410 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::li_KCurrentState
private

Definition at line 400 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::li_mPro
private

Definition at line 409 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::li_NaCurrentState
private

Definition at line 401 of file N_DEV_Neuron3.h.

int Xyce::Device::Neuron3::Instance::li_Neg
private

Definition at line 405 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::li_nPro
private

Definition at line 408 of file N_DEV_Neuron3.h.

int Xyce::Device::Neuron3::Instance::li_Pos
private

Definition at line 404 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::li_Vol
private

Definition at line 407 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::MEquMNodeOffset
private

Definition at line 426 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::MEquVNodeOffset
private

Definition at line 425 of file N_DEV_Neuron3.h.

Model& Xyce::Device::Neuron3::Instance::model_
private

Definition at line 339 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::NEquNNodeOffset
private

Definition at line 424 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::NEquVNodeOffset
private

Definition at line 423 of file N_DEV_Neuron3.h.

int Xyce::Device::Neuron3::Instance::nSeg
private

Definition at line 348 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::nSegGiven
private

Definition at line 352 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::potassiumCurrent
private

Definition at line 396 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::radius
private

Definition at line 345 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::radiusGiven
private

Definition at line 350 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::radiusNext
private

Definition at line 361 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::radiusNextGiven
private

Definition at line 367 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::radiusPrevious
private

Definition at line 358 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::radiusPreviousGiven
private

Definition at line 364 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::rInt
private

Definition at line 344 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::rIntGiven
private

Definition at line 349 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::rIntNext
private

Definition at line 360 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::rIntNextGiven
private

Definition at line 366 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::rIntPrevious
private

Definition at line 357 of file N_DEV_Neuron3.h.

bool Xyce::Device::Neuron3::Instance::rIntPreviousGiven
private

Definition at line 363 of file N_DEV_Neuron3.h.

double Xyce::Device::Neuron3::Instance::segArea
private

Definition at line 347 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segF_dh
private

Definition at line 389 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segF_dm
private

Definition at line 389 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segF_dn
private

Definition at line 389 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segF_dV
private

Definition at line 389 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segF_dVn
private

Definition at line 389 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segF_dVp
private

Definition at line 389 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segFvalue
private

Definition at line 380 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segHEquFvalue
private

Definition at line 384 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segHEquQvalue
private

Definition at line 384 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segMEquFvalue
private

Definition at line 383 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segMEquQvalue
private

Definition at line 383 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segNEquFvalue
private

Definition at line 382 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segNEquQvalue
private

Definition at line 382 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segQ_dV
private

Definition at line 390 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::segQvalue
private

Definition at line 381 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::SegVEqnHOffset
private

Definition at line 422 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::SegVEqnMOffset
private

Definition at line 421 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::SegVEqnNOffset
private

Definition at line 420 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::SegVEqnVnexOffset
private

Definition at line 419 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::SegVEqnVpreOffset
private

Definition at line 417 of file N_DEV_Neuron3.h.

std::vector<int> Xyce::Device::Neuron3::Instance::SegVEqnVsegOffset
private

Definition at line 418 of file N_DEV_Neuron3.h.

std::vector<double> Xyce::Device::Neuron3::Instance::sodiumCurrent
private

Definition at line 397 of file N_DEV_Neuron3.h.


The documentation for this class was generated from the following files: